CGenFF: CHARMM General Force Field — SilcsBio User Guide
Molefacture Plugin, Version 2.0
CGenFF Server Ligand Penalties - User discussions - GROMACS forums
QligFEP: an automated workflow for small molecule free energy calculations in Q | Journal of Cheminformatics | Full Text
GitHub - jandom/paramchem: Python scrapper for paramche/cgenff server, small molecule parametrization
Validation of the Generalized Force Fields GAFF, CGenFF, OPLS-AA, and PRODRGFF by Testing Against Experimental Osmotic Coefficient Data for Small Drug-Like Molecules | Journal of Chemical Information and Modeling
How to overcome the error: "CGenFF versions are not equivalent!" in running Gromacs? | ResearchGate
Frontiers | Relative binding free energy calculations with transformato: A molecular dynamics engine-independent tool
How to generate topology of small molecules & ligands for MD Simulation? — Bioinformatics Review
Evaluation of nine condensed-phase force fields of the GROMOS, CHARMM, OPLS, AMBER, and OpenFF families against experimental cross-solvation free ener ... - Physical Chemistry Chemical Physics (RSC Publishing) DOI:10.1039/D1CP00215E
Full article: Free energy perturbation calculations of tetrahydroquinolines complexed to the first bromodomain of BRD4
CHARMM force field parameters for 2′-hydroxybiphenyl-2-sulfinate, 2-hydroxybiphenyl, and related analogs - ScienceDirect
Frontiers | Relative binding free energy calculations with transformato: A molecular dynamics engine-independent tool
Calculations of Absolute Solvation Free Energies with Transformato─Application to the FreeSolv Database Using the CGenFF Force Field | Journal of Chemical Theory and Computation
FFParam: Standalone package for CHARMM additive and Drude polarizable force field parametrization of small molecules - Kumar - 2020 - Journal of Computational Chemistry - Wiley Online Library
Assessing the quality of absolute hydration free energies among CHARMMcompatible ligand parameterization schemes
How to optimization a small molecule with a high penalty score obtained from CGenff? | ResearchGate
CGenFF
Precise force-field-based calculations of octanol-water partition coefficients for the SAMPL7 molecules | SpringerLink
How to generate CHARMM force field for GROMACS using CGenFF? - ECHEMI
Protein-Ligand Complex
Problem in file (Broken structure ini.pdb) generated using CGenFF for proceeding in MD Simulation - User discussions - GROMACS forums
Validation of the Generalized Force Fields GAFF, CGenFF, OPLS-AA, and PRODRGFF by Testing Against Experimental Osmotic Coefficient Data for Small Drug-Like Molecules | Journal of Chemical Information and Modeling
Additive CHARMM force field for naturally occurring modified ribonucleotides - Xu - 2016 - Journal of Computational Chemistry - Wiley Online Library
How to generate CHARMM force field for GROMACS using CGenFF? | ResearchGate
NAMD QM/MM (CGenFF) - Adrea's Notebook and Journal
molecular dynamics - Alternative to CGenFF for generating large ligand topology - Matter Modeling Stack Exchange
Problem while generating JZ4 Topology with CGenFF - User discussions - GROMACS forums
